Vegan-specific signature implies healthier metabolic profile: findings from diet-related multi-omics observational study based on different European populations

Reports hub

1 Reports hub

All reports use an initialization file and custom R functions file in this folder. Initiation file includes basic data preprocessing and wrangling, loading packages, etc. The custom R functions contain definition and description of each custom function used for this project in Roxygen format.

A report 478_code04_methods describes the statistical methodology in details.

Other reports provide a step-by-step analysis of each dataset (microbiome, metabolome, lipidome), detailing linear models that assess the effects of diet, country, and their interaction (diet:country) on individual features. They also include elastic net regression models used to predict vegan status based on omics features and an external validation of both the linear models and predictive regressions using an independent cohort.